Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trdv1A0A075B657 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Trdv1A0A075B657 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdv1A0A075B657 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Gm8503-201ENSMUST00000118131 455 ntBASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdv1A0A075B657 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.4■□□□□ 0.22
Trdv1A0A075B657 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trdv1A0A075B657 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trdv1A0A075B657 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trdv1A0A075B657 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Gm45364-201ENSMUST00000210883 159 ntBASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trdv1A0A075B657 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trdv1A0A075B657 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv1A0A075B657 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv1A0A075B657 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms