Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav14n-3A0A075B645 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav14n-3A0A075B645 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav14n-3A0A075B645 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14n-3A0A075B645 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav14n-3A0A075B645 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trav14n-3A0A075B645 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav14n-3A0A075B645 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14n-3A0A075B645 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14n-3A0A075B645 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Trav14n-3A0A075B645 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav14n-3A0A075B645 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav14n-3A0A075B645 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav14n-3A0A075B645 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav14n-3A0A075B645 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav14n-3A0A075B645 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav14n-3A0A075B645 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav14n-3A0A075B645 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav14n-3A0A075B645 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav14n-3A0A075B645 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav14n-3A0A075B645 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav14n-3A0A075B645 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14n-3A0A075B645 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav14n-3A0A075B645 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14n-3A0A075B645 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14n-3A0A075B645 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav14n-3A0A075B645 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
Trav14n-3A0A075B645 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.21■□□□□ 0.19
Trav14n-3A0A075B645 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Trav14n-3A0A075B645 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav14n-3A0A075B645 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Trav14n-3A0A075B645 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav14n-3A0A075B645 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav14n-3A0A075B645 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav14n-3A0A075B645 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms