Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Gm5812-201ENSMUST00000061073 957 ntBASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13-1A0A075B644 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13-1A0A075B644 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Gm45444-201ENSMUST00000211394 898 ntBASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13-1A0A075B644 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13-1A0A075B644 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13-1A0A075B644 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Gm15546-201ENSMUST00000122095 826 ntBASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Gm43566-201ENSMUST00000196851 808 ntBASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13-1A0A075B644 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trav13-1A0A075B644 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13-1A0A075B644 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13-1A0A075B644 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Gm15820-201ENSMUST00000201566 728 ntBASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13-1A0A075B644 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13-1A0A075B644 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Gm13238-201ENSMUST00000117655 780 ntBASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13-1A0A075B644 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms