Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav6-7-dv9A0A075B639 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.13■□□□□ 0.65
Trav6-7-dv9A0A075B639 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav6-7-dv9A0A075B639 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav6-7-dv9A0A075B639 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav6-7-dv9A0A075B639 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav6-7-dv9A0A075B639 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav6-7-dv9A0A075B639 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trav6-7-dv9A0A075B639 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav6-7-dv9A0A075B639 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.08■□□□□ 0.64
Trav6-7-dv9A0A075B639 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav6-7-dv9A0A075B639 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav6-7-dv9A0A075B639 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav6-7-dv9A0A075B639 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gm11175-201ENSMUST00000116172 543 ntBASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Gm14523-201ENSMUST00000117260 558 ntBASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav6-7-dv9A0A075B639 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms