Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trav1A0A075B5Z4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav1A0A075B5Z4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav1A0A075B5Z4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav1A0A075B5Z4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav1A0A075B5Z4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav1A0A075B5Z4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav1A0A075B5Z4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav1A0A075B5Z4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav1A0A075B5Z4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav1A0A075B5Z4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav1A0A075B5Z4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav1A0A075B5Z4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav1A0A075B5Z4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav1A0A075B5Z4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav1A0A075B5Z4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav1A0A075B5Z4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav1A0A075B5Z4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav1A0A075B5Z4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav1A0A075B5Z4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav1A0A075B5Z4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav1A0A075B5Z4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav1A0A075B5Z4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav1A0A075B5Z4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trav1A0A075B5Z4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav1A0A075B5Z4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav1A0A075B5Z4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav1A0A075B5Z4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.08■□□□□ 0.8
Trav1A0A075B5Z4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav1A0A075B5Z4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav1A0A075B5Z4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav1A0A075B5Z4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trav1A0A075B5Z4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav1A0A075B5Z4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav1A0A075B5Z4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav1A0A075B5Z4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav1A0A075B5Z4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav1A0A075B5Z4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trav1A0A075B5Z4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Trav1A0A075B5Z4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav1A0A075B5Z4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms