Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gm44872-201ENSMUST00000207864 420 ntBASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H2afb2S4R1M3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb2S4R1M3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.71□□□□□ -0.21
H2afb2S4R1M3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms