Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl28Q9JIL2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccl28Q9JIL2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Ccl28Q9JIL2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm5566-201ENSMUST00000116118 459 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm29541-201ENSMUST00000191351 678 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm37714-201ENSMUST00000194742 342 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm2756-201ENSMUST00000195851 400 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccl28Q9JIL2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccl28Q9JIL2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms