Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Gm43474-201ENSMUST00000196415 774 ntBASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim39Q9ESN2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm14716-201ENSMUST00000120138 718 ntBASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm9824-201ENSMUST00000178707 561 ntBASIC12.87□□□□□ -0.35
Trim39Q9ESN2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.87□□□□□ -0.35
Trim39Q9ESN2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm25287-201ENSMUST00000103846 110 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm22918-201ENSMUST00000103855 110 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm10275-202ENSMUST00000168697 495 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm43575-201ENSMUST00000196420 516 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm18049-201ENSMUST00000208909 581 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm10275-201ENSMUST00000092620 635 ntBASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim39Q9ESN2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim39Q9ESN2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim39Q9ESN2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trim39Q9ESN2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms