Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Mir7085-201ENSMUST00000184353 66 ntBASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ripk4Q9ERK0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Carlr-201ENSMUST00000181515 2574 ntBASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ripk4Q9ERK0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Mir1894-201ENSMUST00000122802 81 ntBASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Ripk4Q9ERK0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ripk4Q9ERK0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ripk4Q9ERK0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms