Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Tmem54Q9D7S1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tmem54Q9D7S1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Gm28631-201ENSMUST00000190740 334 ntBASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Gm19220-201ENSMUST00000222682 803 ntBASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tmem54Q9D7S1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm43094-201ENSMUST00000196549 921 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.01□□□□□ -0.49
Tmem54Q9D7S1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 AC155258.1-201ENSMUST00000219303 253 ntBASIC12□□□□□ -0.49
Tmem54Q9D7S1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tmem54Q9D7S1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms