Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22065-201ENSMUST00000103753 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22066-201ENSMUST00000103761 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24932-201ENSMUST00000103763 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24115-201ENSMUST00000103799 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22190-201ENSMUST00000103827 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22191-201ENSMUST00000103831 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24721-201ENSMUST00000103849 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm28018-201ENSMUST00000103869 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm26399-201ENSMUST00000103937 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25349-201ENSMUST00000177728 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm23616-201ENSMUST00000177797 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25871-201ENSMUST00000177816 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24752-201ENSMUST00000178240 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24496-201ENSMUST00000178287 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25649-201ENSMUST00000178476 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25548-201ENSMUST00000178681 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm23147-201ENSMUST00000178841 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm26095-201ENSMUST00000179270 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22171-201ENSMUST00000179283 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm23936-201ENSMUST00000179354 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm22619-201ENSMUST00000179516 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25255-201ENSMUST00000179579 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24755-201ENSMUST00000179691 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm26506-201ENSMUST00000179692 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm25086-201ENSMUST00000179931 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm23243-201ENSMUST00000180047 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24659-201ENSMUST00000180212 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm24169-201ENSMUST00000180244 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm23689-201ENSMUST00000180354 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm27359-201ENSMUST00000184153 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm27785-201ENSMUST00000184268 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm27466-201ENSMUST00000184396 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Gm27703-201ENSMUST00000184836 110 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp4cQ9D7F7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm8410-201ENSMUST00000117225 605 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm12428-201ENSMUST00000119844 727 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 AA619741-201ENSMUST00000195095 646 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp4cQ9D7F7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms