Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nop56Q9D6Z1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Gm11543-201ENSMUST00000120758 370 ntBASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nop56Q9D6Z1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm12350-201ENSMUST00000121208 462 ntBASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nop56Q9D6Z1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Gm44608-201ENSMUST00000206827 855 ntBASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.14□□□□□ -0.15
Nop56Q9D6Z1 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms