Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm6152-201ENSMUST00000151704 340 ntBASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm37424-201ENSMUST00000191727 561 ntBASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Gm11803-201ENSMUST00000119966 444 ntBASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Gm17330-201ENSMUST00000221047 165 ntBASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.3■□□□□ 0.2
Stag1Q9D3E6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm15770-201ENSMUST00000117498 584 ntBASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm13392-201ENSMUST00000117708 150 ntBASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm22331-201ENSMUST00000158066 136 ntBASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Gm8598-201ENSMUST00000221184 836 ntBASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.29■□□□□ 0.2
Stag1Q9D3E6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Gm5687-201ENSMUST00000118252 640 ntBASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Gm8062-201ENSMUST00000139696 444 ntBASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Stag1Q9D3E6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.28■□□□□ 0.2
Stag1Q9D3E6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms