Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 AA543401-201ENSMUST00000164248 1269 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Gm5177-201ENSMUST00000183092 997 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Raet1eQ9CZQ6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Raet1eQ9CZQ6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Raet1eQ9CZQ6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Raet1eQ9CZQ6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.02□□□□□ -0.48
Raet1eQ9CZQ6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Raet1eQ9CZQ6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Raet1eQ9CZQ6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms