Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm15547-201ENSMUST00000122152 333 ntBASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm25700-201ENSMUST00000177693 110 ntBASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnaseh2aQ9CWY8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm25214-201ENSMUST00000104573 129 ntBASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm23699-201ENSMUST00000158835 135 ntBASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnaseh2aQ9CWY8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 BC037039-201ENSMUST00000192003 2205 ntBASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm14109-201ENSMUST00000118814 309 ntBASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Spcs1-203ENSMUST00000226374 592 ntBASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnaseh2aQ9CWY8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnaseh2aQ9CWY8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rnaseh2aQ9CWY8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rnaseh2aQ9CWY8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms