Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska1Q9CPV1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.97□□□□□ -0.33
Ska1Q9CPV1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska1Q9CPV1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.96□□□□□ -0.33
Ska1Q9CPV1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska1Q9CPV1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska1Q9CPV1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms