Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Gm13823-201ENSMUST00000119930 345 ntBASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Gm11745-201ENSMUST00000121669 448 ntBASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim8Q99PJ2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim8Q99PJ2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 BC001981-202ENSMUST00000191393 1545 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim8Q99PJ2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Gm18057-201ENSMUST00000208220 503 ntBASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim8Q99PJ2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms