Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Gm11667-201ENSMUST00000119828 486 ntBASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Gm44545-201ENSMUST00000208262 746 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdh15Q99PJ1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm13996-201ENSMUST00000118456 430 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm13736-201ENSMUST00000119272 253 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm10051-201ENSMUST00000145209 414 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm12380-201ENSMUST00000119012 544 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm37201-201ENSMUST00000191845 523 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.13■□□□□ 0.01
Pcdh15Q99PJ1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms