Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm15371-201ENSMUST00000117057 784 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm4986-201ENSMUST00000119731 549 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm9083-201ENSMUST00000120423 819 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm10275-202ENSMUST00000168697 495 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm18584-201ENSMUST00000203098 964 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm10275-201ENSMUST00000092620 635 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col25a1Q99MQ5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Mir686-201ENSMUST00000102174 109 ntBASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Gm7046-201ENSMUST00000221351 977 ntBASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col25a1Q99MQ5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm15240-201ENSMUST00000118156 720 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm12203-201ENSMUST00000118235 598 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm12209-201ENSMUST00000120089 596 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm18905-201ENSMUST00000205454 928 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Gm18473-201ENSMUST00000220543 868 ntBASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col25a1Q99MQ5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms