Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm10576-201ENSMUST00000191927 825 ntBASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf111Q99ML9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Auts2-212ENSMUST00000178555 309 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 AA619741-201ENSMUST00000195095 646 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf111Q99ML9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.3□□□□□ -0.28
Rnf111Q99ML9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms