Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 AW822252-206ENSMUST00000208904 237 ntBASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nkd1Q99MH6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm13015-201ENSMUST00000118674 204 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm25911-201ENSMUST00000157621 56 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.93□□□□□ -0.34
Nkd1Q99MH6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gm27525-201ENSMUST00000184465 107 ntBASIC12.92□□□□□ -0.34
Nkd1Q99MH6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gm43125-201ENSMUST00000201724 730 ntBASIC12.92□□□□□ -0.34
Nkd1Q99MH6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.92□□□□□ -0.34
Nkd1Q99MH6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkd1Q99MH6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms