Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm12091-201ENSMUST00000146791 830 ntBASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdha2Q91Y17 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdha2Q91Y17 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gm45384-201ENSMUST00000210451 277 ntBASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha2Q91Y17 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm27701-201ENSMUST00000184498 110 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm2495-201ENSMUST00000191160 466 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm6745-201ENSMUST00000199216 526 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm9794-201ENSMUST00000202370 423 ntBASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha2Q91Y17 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms