Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm9396-201ENSMUST00000076703 567 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.59□□□□□ -0.07
TraipQ8VIG6 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TraipQ8VIG6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TraipQ8VIG6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TraipQ8VIG6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Gm8598-201ENSMUST00000221184 836 ntBASIC14.58□□□□□ -0.08
TraipQ8VIG6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.58□□□□□ -0.08
TraipQ8VIG6 Gm26315-201ENSMUST00000083890 321 ntBASIC14.58□□□□□ -0.08
TraipQ8VIG6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.58□□□□□ -0.08
TraipQ8VIG6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.58□□□□□ -0.08
TraipQ8VIG6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TraipQ8VIG6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm24644-201ENSMUST00000157114 139 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.57□□□□□ -0.08
TraipQ8VIG6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TraipQ8VIG6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TraipQ8VIG6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.56□□□□□ -0.08
TraipQ8VIG6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TraipQ8VIG6 Gm14660-201ENSMUST00000119809 575 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms