Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Odf4Q8VI88 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Odf4Q8VI88 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Odf4Q8VI88 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.34□□□□□ -0.43
Odf4Q8VI88 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Odf4Q8VI88 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Odf4Q8VI88 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Odf4Q8VI88 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Gm14767-201ENSMUST00000121559 586 ntBASIC12.33□□□□□ -0.44
Odf4Q8VI88 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Gm27306-201ENSMUST00000183970 107 ntBASIC12.33□□□□□ -0.44
Odf4Q8VI88 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Odf4Q8VI88 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm5479-201ENSMUST00000160578 435 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 Mir7684-201ENSMUST00000183858 60 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm28630-201ENSMUST00000187806 498 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.32□□□□□ -0.44
Odf4Q8VI88 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Odf4Q8VI88 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Gm13823-201ENSMUST00000119930 345 ntBASIC12.31□□□□□ -0.44
Odf4Q8VI88 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.31□□□□□ -0.44
Odf4Q8VI88 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.31□□□□□ -0.44
Odf4Q8VI88 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Odf4Q8VI88 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms