Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm22619-201ENSMUST00000179516 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25255-201ENSMUST00000179579 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24755-201ENSMUST00000179691 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm26506-201ENSMUST00000179692 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm25086-201ENSMUST00000179931 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm23243-201ENSMUST00000180047 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24659-201ENSMUST00000180212 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm24169-201ENSMUST00000180244 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm23689-201ENSMUST00000180354 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm27359-201ENSMUST00000184153 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm27785-201ENSMUST00000184268 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm27466-201ENSMUST00000184396 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm27703-201ENSMUST00000184836 110 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.2□□□□□ -0.14
Trim60Q8VI40 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim60Q8VI40 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim60Q8VI40 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.19□□□□□ -0.14
Trim60Q8VI40 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm29541-201ENSMUST00000191351 678 ntBASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm33320-201ENSMUST00000192232 530 ntBASIC14.19□□□□□ -0.14
Trim60Q8VI40 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.19□□□□□ -0.14
Trim60Q8VI40 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim60Q8VI40 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Gm24543-201ENSMUST00000103867 82 ntBASIC14.18□□□□□ -0.14
Trim60Q8VI40 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms