Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Gm15427-201ENSMUST00000117288 531 ntBASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdh18Q8VHR0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm11543-201ENSMUST00000120758 370 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh18Q8VHR0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms