Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gm8927-201ENSMUST00000181978 981 ntBASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Gm3222-201ENSMUST00000071282 990 ntBASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cchcr1Q8K2I2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm12585-201ENSMUST00000117307 290 ntBASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm10766-202ENSMUST00000194123 606 ntBASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.23■□□□□ 0.19
Cchcr1Q8K2I2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gm13385-201ENSMUST00000121089 220 ntBASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gm26308-201ENSMUST00000157768 69 ntBASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cchcr1Q8K2I2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cchcr1Q8K2I2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms