Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Gm8584-201ENSMUST00000171982 758 ntBASIC13.86□□□□□ -0.19
Clip4Q8CI96 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clip4Q8CI96 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm12428-201ENSMUST00000119844 727 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm27321-201ENSMUST00000185021 205 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm7775-201ENSMUST00000218871 853 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Mir125a-201ENSMUST00000083545 68 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.85□□□□□ -0.19
Clip4Q8CI96 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clip4Q8CI96 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.84□□□□□ -0.19
Clip4Q8CI96 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.84□□□□□ -0.19
Clip4Q8CI96 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.84□□□□□ -0.19
Clip4Q8CI96 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Mir7684-201ENSMUST00000183858 60 ntBASIC13.84□□□□□ -0.19
Clip4Q8CI96 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Gm46209-201ENSMUST00000217912 553 ntBASIC13.84□□□□□ -0.19
Clip4Q8CI96 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clip4Q8CI96 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms