Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rab11fip3Q8CHD8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Rab11fip3Q8CHD8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rab11fip3Q8CHD8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rab11fip3Q8CHD8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip3Q8CHD8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm29127-201ENSMUST00000188304 517 ntBASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip3Q8CHD8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gm13226-201ENSMUST00000117838 404 ntBASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gm10156-201ENSMUST00000122364 462 ntBASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gm24644-201ENSMUST00000157114 139 ntBASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gm45784-201ENSMUST00000188360 142 ntBASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip3Q8CHD8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms