Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gm5779-201ENSMUST00000218467 910 ntBASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc87Q8CDL9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Gm22175-201ENSMUST00000175007 78 ntBASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc87Q8CDL9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Gm18049-201ENSMUST00000208909 581 ntBASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc87Q8CDL9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Gm10576-201ENSMUST00000191927 825 ntBASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms