Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm9899-201ENSMUST00000065519 555 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scfd1Q8BRF7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Gm27731-201ENSMUST00000185192 107 ntBASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scfd1Q8BRF7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scfd1Q8BRF7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Gm12742-201ENSMUST00000117326 410 ntBASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Snora78-201ENSMUST00000158630 128 ntBASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Gm43630-201ENSMUST00000201550 776 ntBASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scfd1Q8BRF7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms