Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4Q8BQZ5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4Q8BQZ5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Cpsf4Q8BQZ5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4Q8BQZ5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4Q8BQZ5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4Q8BQZ5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cpsf4Q8BQZ5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Mir8102-201ENSMUST00000184148 139 ntBASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4Q8BQZ5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms