Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trpa1Q8BLA8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm15393-201ENSMUST00000120499 219 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm15321-201ENSMUST00000121290 288 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm27437-201ENSMUST00000183429 107 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm37714-201ENSMUST00000194742 342 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm44855-201ENSMUST00000205725 362 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trpa1Q8BLA8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Gm18027-201ENSMUST00000218947 619 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trpa1Q8BLA8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trpa1Q8BLA8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trpa1Q8BLA8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trpa1Q8BLA8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trpa1Q8BLA8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trpa1Q8BLA8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms