Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm27618-201ENSMUST00000183671 60 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm44344-201ENSMUST00000200287 129 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm6916-202ENSMUST00000205523 195 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm18027-201ENSMUST00000218947 619 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn3Q8BHH8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clrn3Q8BHH8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Mir6956-201ENSMUST00000183598 62 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm5425-201ENSMUST00000214125 459 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm46209-201ENSMUST00000217912 553 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm6888-201ENSMUST00000221983 706 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clrn3Q8BHH8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms