Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Depdc1bQ8BH88 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Gm6916-202ENSMUST00000205523 195 ntBASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Depdc1bQ8BH88 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm4875-201ENSMUST00000118257 786 ntBASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm43703-201ENSMUST00000200523 763 ntBASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.92□□□□□ -0.02
Depdc1bQ8BH88 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Gm29667-201ENSMUST00000190817 490 ntBASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Gm29741-201ENSMUST00000192667 421 ntBASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Gm9229-201ENSMUST00000222777 126 ntBASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Depdc1bQ8BH88 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Depdc1bQ8BH88 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms