Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gm27306-201ENSMUST00000183970 107 ntBASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Samm50Q8BGH2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Mir8102-201ENSMUST00000184148 139 ntBASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Gm16476-201ENSMUST00000221544 139 ntBASIC16.1■□□□□ 0.17
Samm50Q8BGH2 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Samm50Q8BGH2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 AA619741-201ENSMUST00000195095 646 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Gm46209-201ENSMUST00000217912 553 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Mir125a-201ENSMUST00000083545 68 ntBASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms