Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh19Q80TF3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm27892-201ENSMUST00000185017 106 ntBASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh19Q80TF3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdh19Q80TF3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh19Q80TF3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.44□□□□□ -0.26
Pcdh19Q80TF3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms