Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm6023-201ENSMUST00000118217 606 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm2231-201ENSMUST00000125661 612 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm44069-201ENSMUST00000204898 506 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gm7046-201ENSMUST00000221351 977 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx55Q6ZPL9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Gm27320-201ENSMUST00000184892 109 ntBASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx55Q6ZPL9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx55Q6ZPL9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Gm7809-201ENSMUST00000153199 742 ntBASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx55Q6ZPL9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms