Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm7541-201ENSMUST00000118361 535 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm6630-201ENSMUST00000119199 454 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Mir1901-201ENSMUST00000122616 78 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm26956-201ENSMUST00000182176 986 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 AA914427-201ENSMUST00000193194 1166 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm43778-201ENSMUST00000199438 199 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm11591-201ENSMUST00000120063 702 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.54□□□□□ -0.56
Rif1Q6PR54 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rif1Q6PR54 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm23153-201ENSMUST00000175323 313 ntBASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm37042-201ENSMUST00000193816 581 ntBASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.53□□□□□ -0.56
Rif1Q6PR54 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rif1Q6PR54 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm11801-201ENSMUST00000117807 746 ntBASIC11.52□□□□□ -0.56
Rif1Q6PR54 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm13464-201ENSMUST00000119418 935 ntBASIC11.52□□□□□ -0.56
Rif1Q6PR54 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Morn2-202ENSMUST00000227729 656 ntBASIC11.52□□□□□ -0.56
Rif1Q6PR54 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rif1Q6PR54 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.52□□□□□ -0.57
Rif1Q6PR54 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rif1Q6PR54 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms