Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Snrnp40Q6PE01 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Snrnp40Q6PE01 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm12403-201ENSMUST00000121384 959 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm7029-201ENSMUST00000173226 450 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm10608-202ENSMUST00000213924 676 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm16372-201ENSMUST00000073088 450 ntBASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Snrnp40Q6PE01 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm11618-201ENSMUST00000117946 267 ntBASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Snrnp40Q6PE01 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms