Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chd4Q6PDQ2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd4Q6PDQ2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gm15808-201ENSMUST00000119046 604 ntBASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.57■□□□□ 0.4
Chd4Q6PDQ2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Gm25043-201ENSMUST00000158604 212 ntBASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Gm8227-201ENSMUST00000223306 571 ntBASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd4Q6PDQ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm10608-202ENSMUST00000213924 676 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Chd4Q6PDQ2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms