Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AtmQ62388 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
AtmQ62388 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Gm17330-201ENSMUST00000221047 165 ntBASIC12.7□□□□□ -0.38
AtmQ62388 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.7□□□□□ -0.38
AtmQ62388 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
AtmQ62388 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.7□□□□□ -0.38
AtmQ62388 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.69□□□□□ -0.38
AtmQ62388 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.69□□□□□ -0.38
AtmQ62388 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.69□□□□□ -0.38
AtmQ62388 Gm44069-201ENSMUST00000204898 506 ntBASIC12.69□□□□□ -0.38
AtmQ62388 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
AtmQ62388 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AtmQ62388 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AtmQ62388 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AtmQ62388 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.69□□□□□ -0.38
AtmQ62388 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.69□□□□□ -0.38
AtmQ62388 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AtmQ62388 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
AtmQ62388 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AtmQ62388 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.68□□□□□ -0.38
AtmQ62388 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Gm38144-201ENSMUST00000192790 465 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.68□□□□□ -0.38
AtmQ62388 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.68□□□□□ -0.38
AtmQ62388 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.68□□□□□ -0.38
AtmQ62388 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.68□□□□□ -0.38
AtmQ62388 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AtmQ62388 Gm12029-201ENSMUST00000120073 832 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.68□□□□□ -0.38
AtmQ62388 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.68□□□□□ -0.38
AtmQ62388 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AtmQ62388 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.68□□□□□ -0.38
AtmQ62388 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.68□□□□□ -0.38
AtmQ62388 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AtmQ62388 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AtmQ62388 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AtmQ62388 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AtmQ62388 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.67□□□□□ -0.38
AtmQ62388 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AtmQ62388 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AtmQ62388 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms