Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm25214-201ENSMUST00000104573 129 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm15276-201ENSMUST00000145953 498 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.84■□□□□ 0.13
Scn9aQ62205 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scn9aQ62205 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Scn9aQ62205 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Gm44967-201ENSMUST00000207047 631 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.84■□□□□ 0.13
Scn9aQ62205 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn9aQ62205 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn9aQ62205 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn9aQ62205 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn9aQ62205 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn9aQ62205 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn9aQ62205 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Scn9aQ62205 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn9aQ62205 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn9aQ62205 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.83■□□□□ 0.12
Scn9aQ62205 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.83■□□□□ 0.12
Scn9aQ62205 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn9aQ62205 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.82■□□□□ 0.12
Scn9aQ62205 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn9aQ62205 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.82■□□□□ 0.12
Scn9aQ62205 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Gm13097-201ENSMUST00000210722 397 ntBASIC15.82■□□□□ 0.12
Scn9aQ62205 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn9aQ62205 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn9aQ62205 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn9aQ62205 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn9aQ62205 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Scn9aQ62205 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn9aQ62205 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Gm8885-201ENSMUST00000189382 598 ntBASIC15.81■□□□□ 0.12
Scn9aQ62205 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.81■□□□□ 0.12
Scn9aQ62205 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn9aQ62205 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.81■□□□□ 0.12
Scn9aQ62205 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms