Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.69□□□□□ -0.38
Cd53Q61451 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.69□□□□□ -0.38
Cd53Q61451 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.69□□□□□ -0.38
Cd53Q61451 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cd53Q61451 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.69□□□□□ -0.38
Cd53Q61451 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd53Q61451 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cd53Q61451 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.68□□□□□ -0.38
Cd53Q61451 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cd53Q61451 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gm6415-201ENSMUST00000118488 348 ntBASIC12.68□□□□□ -0.38
Cd53Q61451 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.68□□□□□ -0.38
Cd53Q61451 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.68□□□□□ -0.38
Cd53Q61451 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cd53Q61451 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cd53Q61451 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cd53Q61451 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.67□□□□□ -0.38
Cd53Q61451 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd53Q61451 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd53Q61451 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Gm15693-201ENSMUST00000120470 637 ntBASIC12.67□□□□□ -0.38
Cd53Q61451 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cd53Q61451 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Cd53Q61451 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cd53Q61451 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.67□□□□□ -0.38
Cd53Q61451 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Cd53Q61451 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cd53Q61451 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cd53Q61451 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cd53Q61451 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms