Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.84□□□□□ -0.19
Six4Q61321 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Six4Q61321 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.84□□□□□ -0.19
Six4Q61321 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.84□□□□□ -0.19
Six4Q61321 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.84□□□□□ -0.19
Six4Q61321 Gm26464-201ENSMUST00000157094 305 ntBASIC13.84□□□□□ -0.19
Six4Q61321 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.84□□□□□ -0.19
Six4Q61321 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.84□□□□□ -0.19
Six4Q61321 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Six4Q61321 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Six4Q61321 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Six4Q61321 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six4Q61321 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six4Q61321 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Six4Q61321 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Six4Q61321 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Six4Q61321 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six4Q61321 Gm15770-201ENSMUST00000117498 584 ntBASIC13.83□□□□□ -0.2
Six4Q61321 Gm11524-201ENSMUST00000119349 807 ntBASIC13.83□□□□□ -0.2
Six4Q61321 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.83□□□□□ -0.2
Six4Q61321 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six4Q61321 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six4Q61321 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Six4Q61321 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.83□□□□□ -0.2
Six4Q61321 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Six4Q61321 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Six4Q61321 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Six4Q61321 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six4Q61321 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.82□□□□□ -0.2
Six4Q61321 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Gm12485-201ENSMUST00000119641 291 ntBASIC13.82□□□□□ -0.2
Six4Q61321 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.82□□□□□ -0.2
Six4Q61321 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Six4Q61321 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Six4Q61321 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.82□□□□□ -0.2
Six4Q61321 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.82□□□□□ -0.2
Six4Q61321 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Six4Q61321 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Six4Q61321 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms