Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc6a4Q60857 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Slc6a4Q60857 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc6a4Q60857 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Slc6a4Q60857 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.02□□□□□ -0.16
Slc6a4Q60857 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Slc6a4Q60857 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.02□□□□□ -0.17
Slc6a4Q60857 Gm29608-201ENSMUST00000190444 463 ntBASIC14.02□□□□□ -0.17
Slc6a4Q60857 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a4Q60857 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm15371-201ENSMUST00000117057 784 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Mir1894-201ENSMUST00000122802 81 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm27839-201ENSMUST00000184242 106 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm44397-201ENSMUST00000195950 113 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm42550-201ENSMUST00000201553 960 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm7287-201ENSMUST00000205267 602 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.01□□□□□ -0.17
Slc6a4Q60857 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a4Q60857 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14□□□□□ -0.17
Slc6a4Q60857 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14□□□□□ -0.17
Slc6a4Q60857 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14□□□□□ -0.17
Slc6a4Q60857 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a4Q60857 Gm12537-201ENSMUST00000119266 1002 ntBASIC14□□□□□ -0.17
Slc6a4Q60857 Gm12070-201ENSMUST00000119551 1002 ntBASIC14□□□□□ -0.17
Slc6a4Q60857 Gm12671-201ENSMUST00000119978 1002 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms