Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ClpbQ60649 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.18□□□□□ -0.3
ClpbQ60649 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Gm29667-201ENSMUST00000190817 490 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.18□□□□□ -0.3
ClpbQ60649 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Gm2423-201ENSMUST00000074863 733 ntBASIC13.18□□□□□ -0.3
ClpbQ60649 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ClpbQ60649 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ClpbQ60649 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.18□□□□□ -0.3
ClpbQ60649 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClpbQ60649 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ClpbQ60649 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.17□□□□□ -0.3
ClpbQ60649 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ClpbQ60649 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ClpbQ60649 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ClpbQ60649 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.17□□□□□ -0.3
ClpbQ60649 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClpbQ60649 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClpbQ60649 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClpbQ60649 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
ClpbQ60649 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Gm7488-201ENSMUST00000117148 684 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ClpbQ60649 Gm15321-201ENSMUST00000121290 288 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms