Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.08□□□□□ -0.32
Nr1h4Q60641 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.07□□□□□ -0.32
Nr1h4Q60641 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm5364-201ENSMUST00000216789 889 ntBASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.07□□□□□ -0.32
Nr1h4Q60641 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nr1h4Q60641 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.06□□□□□ -0.32
Nr1h4Q60641 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.06□□□□□ -0.32
Nr1h4Q60641 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Gm18027-201ENSMUST00000218947 619 ntBASIC13.06□□□□□ -0.32
Nr1h4Q60641 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nr1h4Q60641 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms