Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-3Q5R1C3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-3Q5R1C3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm4535-201ENSMUST00000182274 558 ntBASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm17807-201ENSMUST00000186869 298 ntBASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm10355-201ENSMUST00000097146 517 ntBASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-3Q5R1C3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms