Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn2bQ56A07 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.59□□□□□ -0.23
Scn2bQ56A07 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.59□□□□□ -0.23
Scn2bQ56A07 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn2bQ56A07 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scn2bQ56A07 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.58□□□□□ -0.23
Scn2bQ56A07 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Scn2bQ56A07 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scn2bQ56A07 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn2bQ56A07 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn2bQ56A07 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.58□□□□□ -0.23
Scn2bQ56A07 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.58□□□□□ -0.24
Scn2bQ56A07 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Mir125a-201ENSMUST00000083545 68 ntBASIC13.58□□□□□ -0.24
Scn2bQ56A07 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.58□□□□□ -0.24
Scn2bQ56A07 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.58□□□□□ -0.24
Scn2bQ56A07 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Scn2bQ56A07 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.57□□□□□ -0.24
Scn2bQ56A07 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gm5566-201ENSMUST00000116118 459 ntBASIC13.57□□□□□ -0.24
Scn2bQ56A07 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 AA543401-201ENSMUST00000164248 1269 ntBASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms